Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: RNF44 ENSSSCG00000014056

.

Description

ring finger protein 44 [Source:VGNC Symbol;Acc:VGNC:92395]

Location

Primary_assembly 2: 81,378,725-81,390,230 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 3 transcripts (splice variants), 194 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000038286.3	RNF44-202	3279	432aa	ENSSSCP00000052769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B8W4 A0A4X1SJV2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000015355.5	RNF44-203	3734	399aa	ENSSSCP00000014947.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D2BVI7 F1S3A0	-
ENSSSCT00000060557.3	RNF44-201	3637	424aa	ENSSSCP00000039424.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A624 A0A8D0YRL4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

.

Summary

.

.