Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: USP47 ENSSSCG00000013402

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Description

ubiquitin specific peptidase 47 [Source:VGNC Symbol;Acc:VGNC:94769]

Location

Primary_assembly 2: 47,449,161-47,582,819 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 4 transcripts (splice variants), 206 orthologues and 51 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000047661.3	USP47-204	7560	1375aa	ENSSSCP00000041261.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ABS5 A0A4X1TNL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000074543.2	USP47-203	5455	1287aa	ENSSSCP00000068002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TTD7 A0A5G2R1C4	-
ENSSSCT00000082991.1	USP47-202	4071	1356aa	ENSSSCP00000063353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QMK9 A0A8D1LHF4	-
ENSSSCT00000083090.2	USP47-201	3972	1323aa	ENSSSCP00000074418.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RBM9	-

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Summary

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