Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMARCA1 ENSSSCG00000012649

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Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:VGNC Symbol;Acc:VGNC:93225]

Location

Primary_assembly X: 106,039,969-106,116,139 reverse strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 5 transcripts (splice variants), 209 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000033549.3	SMARCA1-205	4263	1061aa	ENSSSCP00000028784.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W2H5 K7GLQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000088402.2	SMARCA1-202	4978	1005aa	ENSSSCP00000071156.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W7H3 A0A5G2R1U6	-
ENSSSCT00000032734.4	SMARCA1-204	4105	1051aa	ENSSSCP00000029556.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1TVE6 K7GNV1	-
ENSSSCT00000013830.5	SMARCA1-203	3992	1022aa	ENSSSCP00000013448.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0VYB1 F1RTI9	-
ENSSSCT00000071106.1	SMARCA1-201	2775	924aa	ENSSSCP00000071905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R6D4 A0A8D0JHH5	-

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Summary

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