Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: MBNL1 ENSSSCG00000011720

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Description

muscleblind like splicing regulator 1 [Source:VGNC Symbol;Acc:VGNC:90054]

Location

Primary_assembly 13: 92,491,808-92,696,230 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 9 transcripts (splice variants), 273 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000048254.3	MBNL1-209	5725	399aa	ENSSSCP00000043321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480ZSM5 A0A8D0XNG9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000057166.3	MBNL1-205	5655	387aa	ENSSSCP00000047169.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AT92	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000054786.3	MBNL1-207	5525	369aa	ENSSSCP00000043201.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B0V621 A0A4X1SUF3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000039585.3	MBNL1-202	5512	339aa	ENSSSCP00000036574.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZY60 A0A8D0JLW0	-
ENSSSCT00000062265.3	MBNL1-204	5496	341aa	ENSSSCP00000035330.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0JCX6 A0A8D1UKQ0	-
ENSSSCT00000051296.3	MBNL1-208	5324	302aa	ENSSSCP00000048270.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AVV5	-
ENSSSCT00000057375.3	MBNL1-203	4015	347aa	ENSSSCP00000056534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0XLL0 A0A8D1Q3C1	-
ENSSSCT00000051284.3	MBNL1-206	2081	353aa	ENSSSCP00000034765.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZTG2	-
ENSSSCT00000012830.5	MBNL1-201	1200	399aa	ENSSSCP00000012490.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1EZM5 A0A8D1UKR2	-

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Summary

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