Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RAB7A ENSSSCG00000011615

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Description

RAB7A, member RAS onco family [Source:VGNC Symbol;Acc:VGNC:98273]

Location

Primary_assembly 13: 71,777,424-71,852,694 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 9 transcripts (splice variants), 314 orthologues and 65 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000043009.3	RAB7A-206	2080	252aa	ENSSSCP00000033254.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZP69	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000089194.1	RAB7A-203	4976	203aa	ENSSSCP00000074035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U1L8 A0A5G2RMX2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000106658.1	RAB7A-201	4788	201aa	ENSSSCP00000078566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FGK5	-
ENSSSCT00000073226.2	RAB7A-209	2043	108aa	ENSSSCP00000065705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QNS1 A0A8D1KU60	-
ENSSSCT00000012712.5	RAB7A-202	2027	195aa	ENSSSCP00000012378.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TZA2 F1SPG0	-
ENSSSCT00000047733.3	RAB7A-207	1955	213aa	ENSSSCP00000058849.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BQX8 A0A8D1TTL7	-
ENSSSCT00000071892.2	RAB7A-208	1259	134aa	ENSSSCP00000073959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U1M8 A0A5G2RMS7	-
ENSSSCT00000053991.3	RAB7A-204	990	252aa	ENSSSCP00000032899.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZMP2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000085904.2	RAB7A-205	507	91aa	ENSSSCP00000068652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TZ93 A0A5G2R382	-

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Summary

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