Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TBC1D5 ENSSSCG00000011199

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Description

TBC1 domain family member 5 [Source:VGNC Symbol;Acc:VGNC:98360]

Location

Primary_assembly 13: 4,201,255-4,633,312 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000086986.2	TBC1D5-202	5091	791aa	ENSSSCP00000064981.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QJK6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000060482.3	TBC1D5-203	4884	722aa	ENSSSCP00000046266.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQT3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000071785.1	TBC1D5-201	4647	592aa	ENSSSCP00000060017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QP04 A0A8D1JVF9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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