Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ANKRD13A ENSSSCG00000009924

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Description

ankyrin repeat domain 13A [Source:VGNC Symbol;Acc:VGNC:85324]

Location

Primary_assembly 14: 40,954,347-40,990,451 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 8 transcripts (splice variants), 207 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000043051.3	ANKRD13A-205	3845	648aa	ENSSSCP00000043924.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AJ61	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000059133.2	ANKRD13A-203	5425	508aa	ENSSSCP00000048973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AXV3 A0A8D0PFP5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000078770.2	ANKRD13A-204	5401	500aa	ENSSSCP00000071132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RI29 A0A8D1JAD8	-
ENSSSCT00000040839.3	ANKRD13A-201	3755	550aa	ENSSSCP00000049520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AZY2 A0A4X1T501	-
ENSSSCT00000039836.3	ANKRD13A-202	3720	540aa	ENSSSCP00000041625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ACL0 A0A4X1T5U1	-
ENSSSCT00000072604.2	ANKRD13A-206	2100	600aa	ENSSSCP00000071804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RJ60 A0A8D1TKM3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000039465.3	ANKRD13A-207	1401	367aa	ENSSSCP00000035289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZV10 A0A4X1T505	-
ENSSSCT00000010875.5	ANKRD13A-208	1400	323aa	ENSSSCP00000010590.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480VV65 A0A4X1T506	-

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Summary

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