Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: WDR90 ENSSSCG00000007991

.

Description

WD repeat domain 90 [Source:VGNC Symbol;Acc:VGNC:94948]

Location

Primary_assembly 3: 41,106,720-41,122,426 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 6 transcripts (splice variants), 169 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000101378.1	WDR90-205	5703	1805aa	ENSSSCP00000080726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FMK7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000023121.4	WDR90-202	5776	1743aa	ENSSSCP00000022115.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LDI4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000101752.1	WDR90-203	5773	1742aa	ENSSSCP00000080124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FLA7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000097802.1	WDR90-204	5764	1739aa	ENSSSCP00000080369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FM04	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000092788.1	WDR90-201	5643	1785aa	ENSSSCP00000078014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FF08	-
ENSSSCT00000095509.1	WDR90-206	5568	1760aa	ENSSSCP00000075622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F8M5	-

.

Summary

.

.