Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RABGEF1 ENSSSCG00000007735

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Description

RAB guanine nucleotide exchange factor 1 [Source:VGNC Symbol;Acc:VGNC:108510]

Location

Primary_assembly 3: 16,308,120-16,376,592 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 3 transcripts (splice variants), 229 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000088016.2	RABGEF1-201	3580	504aa	ENSSSCP00000064947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QSH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000098409.1	RABGEF1-202	3734	503aa	ENSSSCP00000079605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SVQ1 A0A8D0SV08	-
ENSSSCT00000008480.5	RABGEF1-203	3664	491aa	ENSSSCP00000008261.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SXM4 F1RJI2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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