Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS45 ENSSSCG00000006661

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Description

vacuolar protein sorting 45 homolog [Source:NCBI gene (formerly Entrezgene);Acc:100514766]

Location

Primary_assembly 4: 98,939,584-99,010,585 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 6 transcripts (splice variants), 206 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000007298.5	VPS45-201	2391	570aa	ENSSSCP00000007103.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SHS6 A0A8D0MDV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000060515.3	VPS45-203	2255	547aa	ENSSSCP00000045873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SHY1 A0A8D1EDG0	-
ENSSSCT00000071352.2	VPS45-204	2186	525aa	ENSSSCP00000068019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0MC35 A0A8D1S6E5	-
ENSSSCT00000053229.3	VPS45-202	2096	533aa	ENSSSCP00000047290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SHV4 A0A8D0TTM9	-
ENSSSCT00000071423.2	VPS45-205	1916	548aa	ENSSSCP00000066748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1CXI4 A0A8D1US68	-
ENSSSCT00000090515.2	VPS45-206	411	94aa	ENSSSCP00000074481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RNL2 A0A8D0T6F0	-

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Summary

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