Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDP1 ENSSSCG00000006107

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Description

pyruvate dehydrogenase phosphatase catalytic subunit 1 [Source:VGNC Symbol;Acc:VGNC:91286]

Location

Primary_assembly 4: 42,764,441-42,777,904 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 5 transcripts (splice variants), 203 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000091948.1	PDP1-201	1897	565aa	ENSSSCP00000076831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B9C6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000090520.2	PDP1-205	9051	537aa	ENSSSCP00000066199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0WRP4 F1RY43	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000057252.2	PDP1-204	5081	562aa	ENSSSCP00000039179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A5F9 A0A4X1U8I2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000074982.2	PDP1-203	4552	537aa	ENSSSCP00000072525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0WRP4 F1RY43	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000006699.4	PDP1-202	4215	537aa	ENSSSCP00000006519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0WRP4 F1RY43	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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