Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CXXC1 ENSSSCG00000004517

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Description

CXXC finger protein 1 [Source:VGNC Symbol;Acc:VGNC:87116]

Location

Primary_assembly 1: 99,934,497-99,940,130 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 3 transcripts (splice variants), 187 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000046430.3	CXXC1-203	2517	665aa	ENSSSCP00000043581.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AHW1 A0A8D1ALQ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000004989.4	CXXC1-202	2358	652aa	ENSSSCP00000004872.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UJF4 F1RPP3	-
ENSSSCT00000096366.1	CXXC1-201	2092	617aa	ENSSSCP00000075984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0N0L6 A0A8W4F9B3	-

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Summary

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