Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: UBE4B ENSSSCG00000003398

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Description

ubiquitination factor E4B [Source:VGNC Symbol;Acc:VGNC:94657]

Location

Primary_assembly 6: 70,345,813-70,462,434 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 5 transcripts (splice variants), 212 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000103284.1	UBE4B-204	6081	1347aa	ENSSSCP00000078589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FGZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000024710.4	UBE4B-203	6300	1114aa	ENSSSCP00000026348.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0IY74 I3LQG8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000003769.5	UBE4B-202	5932	1297aa	ENSSSCP00000003682.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RIG2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000100177.1	UBE4B-205	5151	1109aa	ENSSSCP00000077196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0T5R5 A0A8D1LVZ3	-
ENSSSCT00000074343.1	UBE4B-201	853	100aa	ENSSSCP00000060441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0WRE9 A0A8D1LXR5	-

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Summary

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