Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MAP3K9 ENSSSCG00000002329

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Description

mitogen-activated protein kinase kinase kinase 9 [Source:VGNC Symbol;Acc:VGNC:89989]

Location

Primary_assembly 7: 94,303,085-94,380,259 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 2 transcripts (splice variants), 193 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000063657.3	MAP3K9-201	4203	1102aa	ENSSSCP00000037326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A0S9 A0A4X1U0F8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000002592.5	MAP3K9-202	4134	1079aa	ENSSSCP00000002528.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U376 F1S494	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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