Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Gene: WDR44 ENSSSCG00000035488

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Description

WD repeat domain 44 [Source:VGNC Symbol;Acc:VGNC:94921]

Location

Primary_assembly X: 96,950,288-97,027,050 forward strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 3 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000081455.2	WDR44-201	6979	890aa	ENSSSCP00000069239.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWB1 A0A8D1IW92	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000070157.2	WDR44-203	5237	823aa	ENSSSCP00000067201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W5Z3 A0A5G2QST7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000053734.3	WDR44-202	4010	878aa	ENSSSCP00000037318.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A081 A0A8D2BD39	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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