Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COBLL1 ENSSSCG00000025598

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Description

cordon-bleu WH2 repeat protein like 1 [Source:VGNC Symbol;Acc:VGNC:96013]

Location

Primary_assembly 15: 71,343,751-71,498,205 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 3 transcripts (splice variants), 272 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000052857.2	COBLL1-203	4999	1215aa	ENSSSCP00000038957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A580 A0A4X1VHQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000030173.4	COBLL1-201	4890	1191aa	ENSSSCP00000023543.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LHJ6	-
ENSSSCT00000044500.2	COBLL1-202	4739	1130aa	ENSSSCP00000031817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZK31 A0A8D1U5D3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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