Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: DPF1 ENSSSCG00000025160

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Description

double PHD fingers 1 [Source:VGNC Symbol;Acc:VGNC:87412]

Location

Primary_assembly 6: 47,142,702-47,155,346 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 4 transcripts (splice variants), 190 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000025066.4	DPF1-204	1651	435aa	ENSSSCP00000019616.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0ZNK3 I3L6G5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000084952.2	DPF1-201	1624	332aa	ENSSSCP00000070105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R165 A0A8D0ZQI9	-
ENSSSCT00000063651.3	DPF1-202	1569	397aa	ENSSSCP00000037348.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A0B2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000079400.2	DPF1-203	1437	353aa	ENSSSCP00000059965.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QD42	-

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Summary

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