Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NOVA1 ENSSSCG00000024396

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Description

NOVA alternative splicing regulator 1 [Source:VGNC Symbol;Acc:VGNC:90827]

Location

Primary_assembly 7: 72,805,230-72,961,258 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 5 transcripts (splice variants), 294 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000101165.1	NOVA1-204	6699	507aa	ENSSSCP00000080507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SU63 A0A8W4FLZ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000040078.3	NOVA1-205	7144	385aa	ENSSSCP00000039998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SUJ4 A0A8D0IJX9	-
ENSSSCT00000063556.3	NOVA1-203	6434	470aa	ENSSSCP00000055103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SUK3 A0A8D0SEZ5	-
ENSSSCT00000051547.2	NOVA1-202	6286	487aa	ENSSSCP00000040587.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1H5Z5 A0A8D1N7S3	-
ENSSSCT00000031969.2	NOVA1-201	3536	483aa	ENSSSCP00000024774.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SUI3 F1SGT5	-

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Summary

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