Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FBXW11 ENSSSCG00000023307

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Description

F-box and WD repeat domain containing 11 [Source:VGNC Symbol;Acc:VGNC:110660]

Location

Primary_assembly 16: 52,212,607-52,337,913 forward strand.

Sscrofa11.1:CM000827.5

About this gene

This gene has 4 transcripts (splice variants), 237 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000048792.3	FBXW11-204	4397	563aa	ENSSSCP00000040325.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UB89 I3LGM0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000053069.1	FBXW11-203	4269	529aa	ENSSSCP00000055337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BG66 A0A8D1XHX6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000054736.2	FBXW11-202	4170	508aa	ENSSSCP00000046007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U9B3 A0A8D1SLF5	-
ENSSSCT00000058532.3	FBXW11-201	3557	542aa	ENSSSCP00000047891.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UBV4 A0A8D1TXC5	-

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Summary

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