Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SATB2 ENSSSCG00000021657

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Description

SATB homeobox 2 [Source:VGNC Symbol;Acc:VGNC:95972]

Location

Primary_assembly 15: 102,964,417-103,158,232 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 3 transcripts (splice variants), 264 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000031264.4	SATB2-203	3338	733aa	ENSSSCP00000026837.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VDY4 I3LRU7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000036717.3	SATB2-202	4374	615aa	ENSSSCP00000056857.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BK10 A0A4X1VE01	-
ENSSSCT00000033962.4	SATB2-201	2782	674aa	ENSSSCP00000029542.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VFU5 A0A5K1V5K7	-

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Summary

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