Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MBTD1 ENSSSCG00000017592

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Description

mbt domain containing 1 [Source:VGNC Symbol;Acc:VGNC:90060]

Location

Primary_assembly 12: 27,450,806-27,526,194 reverse strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 4 transcripts (splice variants), 257 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000019153.5	MBTD1-203	5435	629aa	ENSSSCP00000018646.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0ICY4 F1RSH5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000047530.3	MBTD1-201	5401	437aa	ENSSSCP00000045240.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AMX2	-
ENSSSCT00000042742.3	MBTD1-202	5269	628aa	ENSSSCP00000034112.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZRK9 A0A8D2AAF9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000044386.3	MBTD1-204	5155	604aa	ENSSSCP00000042763.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AFK5	-

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Summary

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