Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LAMP1 ENSSSCG00000009555

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Description

lysosomal associated membrane protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:494565]

Gene Synonyms

LAMP-1

Location

Primary_assembly 11: 78,600,645-78,617,616 forward strand.

Sscrofa11.1:CM000822.5

About this gene

This gene has 2 transcripts (splice variants), 130 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000010474.5	LAMP1-201	2146	413aa	ENSSSCP00000010202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TY20 F1RN44	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000107029.1	LAMP1-202	4311	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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