Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: AUP1 ENSSSCG00000008268

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Description

AUP1 lipid droplet regulating VLDL assembly factor [Source:VGNC Symbol;Acc:VGNC:85696]

Location

Primary_assembly 3: 68,519,969-68,523,073 forward strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 3 transcripts (splice variants) and 197 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000009054.5	AUP1-203	1551	409aa	ENSSSCP00000008826.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1D7F5 F1SNV5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000046871.1	AUP1-202	1311	363aa	ENSSSCP00000042148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1BEH7 A0A8D1WF95	-
ENSSSCT00000069067.2	AUP1-201	1309	370aa	ENSSSCP00000073150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0PSI9 A0A8D1FK98	-

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Summary

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