Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VAV2 ENSSSCG00000005743

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Description

vav guanine nucleotide exchange factor 2 [Source:VGNC Symbol;Acc:VGNC:94808]

Location

Primary_assembly 1: 273,303,144-273,476,207 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000044450.3	VAV2-201	4925	878aa	ENSSSCP00000052682.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B8N4 A0A8D1IAY7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000072520.2	VAV2-202	4895	868aa	ENSSSCP00000074389.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RAN4 A0A8D0RXL9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000006315.5	VAV2-203	4808	839aa	ENSSSCP00000006153.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1XCE1 F1S039	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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