Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGA1 ENSSSCG00000032242

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Description

high mobility group AT-hook 1 [Source:VGNC Symbol;Acc:VGNC:103070]

Location

Primary_assembly 7: 30,320,410-30,329,408 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 2 transcripts (splice variants) and 116 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000051102.3	HMGA1-202	1728	151aa	ENSSSCP00000032411.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZLG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000098878.1	HMGA1-201	1790	107aa	ENSSSCP00000074841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T5Y2 D5KJI2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Gene tree

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