Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TNPO1 ENSSSCG00000027293

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Description

transportin 1 [Source:VGNC Symbol;Acc:VGNC:94287]

Location

Primary_assembly 16: 49,048,686-49,151,922 forward strand.

Sscrofa11.1:CM000827.5

About this gene

This gene has 4 transcripts (splice variants), 224 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000052539.3	TNPO1-204	8776	898aa	ENSSSCP00000047516.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ATU4 A0A4X1UAB7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000086018.1	TNPO1-201	3657	126aa	ENSSSCP00000061408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QHC0 A0A8D1MWY9	-
ENSSSCT00000099687.1	TNPO1-203	3128	890aa	ENSSSCP00000078869.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0IHY9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000102900.1	TNPO1-202	2955	875aa	ENSSSCP00000079450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0LGX4	-

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Gene tree

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