Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TSSK4 ENSSSCG00000025470

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Description

testis specific serine kinase 4 [Source:VGNC Symbol;Acc:VGNC:94527]

Location

Primary_assembly 7: 75,094,926-75,106,331 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 3 transcripts (splice variants), 312 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000058153.2	TSSK4-201	1617	334aa	ENSSSCP00000049028.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AY08 A0A4X1SQN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000023352.3	TSSK4-203	1945	328aa	ENSSSCP00000021352.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1T508 I3LBD3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000102930.1	TSSK4-202	652	135aa	ENSSSCP00000076040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F9T7	-

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Gene tree

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