Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SEC22A ENSSSCG00000024904

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Description

SEC22 homolog A, vesicle trafficking protein [Source:VGNC Symbol;Acc:VGNC:92673]

Location

Primary_assembly 13: 137,170,961-137,250,550 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000039895.3	SEC22A-202	2762	307aa	ENSSSCP00000038297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TGL9 A0A8D0R4Z7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000039608.2	SEC22A-204	6549	285aa	ENSSSCP00000040131.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TEA4 A0A8D0R839	-
ENSSSCT00000057928.3	SEC22A-203	2668	99aa	ENSSSCP00000052570.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TE83 A0A8D0HV56	-
ENSSSCT00000106478.1	SEC22A-201	346	78aa	ENSSSCP00000074844.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TCG8 A0A8W4F6P0	-

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Gene tree

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