Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPRN ENSSSCG00000016218

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Description

protein tyrosine phosphatase receptor type N [Source:VGNC Symbol;Acc:VGNC:96523]

Location

Primary_assembly 15: 121,329,287-121,349,168 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 3 transcripts (splice variants), 256 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000017659.5	PTPRN-201	3564	978aa	ENSSSCP00000017181.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SR78	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000076695.2	PTPRN-202	3477	949aa	ENSSSCP00000067004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QSA5	-
ENSSSCT00000069854.2	PTPRN-203	2575	599aa	ENSSSCP00000069368.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QYZ5	-

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Gene tree

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