Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PMS1 ENSSSCG00000016045

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Description

PMS1 homolog 1, mismatch repair system component [Source:VGNC Symbol;Acc:VGNC:98205]

Location

Primary_assembly 15: 94,351,630-94,476,506 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 6 transcripts (splice variants), 210 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000037786.3	PMS1-205	3577	923aa	ENSSSCP00000054896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BFI9 A0A4X1TJD9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000037039.3	PMS1-203	3399	884aa	ENSSSCP00000054943.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BEI8 A0A8D0RVZ4	-
ENSSSCT00000062488.3	PMS1-206	3094	762aa	ENSSSCP00000047157.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ATG5 A0A4X1TJI0	-
ENSSSCT00000017470.5	PMS1-202	2087	658aa	ENSSSCP00000017000.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TJB1 F1SN54	-
ENSSSCT00000052772.3	PMS1-201	1793	232aa	ENSSSCP00000055751.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BGT8 A0A8D1KTX4	-
ENSSSCT00000067884.1	PMS1-204	940	248aa	ENSSSCP00000074424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RH26 A0A8D2C3H2	-

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Gene tree

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