Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PAAF1 ENSSSCG00000014831

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Description

proteasomal ATPase associated factor 1 [Source:VGNC Symbol;Acc:VGNC:108605]

Location

Primary_assembly 9: 8,278,905-8,335,121 forward strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 8 transcripts (splice variants), 127 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000016183.4	PAAF1-203	1642	415aa	ENSSSCP00000015750.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1SLR9 F2Z5W5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000071283.2	PAAF1-205	2171	392aa	ENSSSCP00000064277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R189 A0A8D1K7W7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000083314.2	PAAF1-202	2120	340aa	ENSSSCP00000072484.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R5W5	-
ENSSSCT00000042065.3	PAAF1-206	2072	359aa	ENSSSCP00000036678.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZYH8 A0A8D0UFG9	-
ENSSSCT00000054161.1	PAAF1-208	1797	362aa	ENSSSCP00000038661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A3W4 A0A8D1L085	-
ENSSSCT00000057593.2	PAAF1-207	1669	383aa	ENSSSCP00000033575.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZPQ0 A0A8D1L099	-
ENSSSCT00000091287.1	PAAF1-201	1547	388aa	ENSSSCP00000072542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1US79 A0A5G2RKD5	-
ENSSSCT00000063752.1	PAAF1-204	1389	327aa	ENSSSCP00000057207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BLC9 A0A8D1TFX1	-

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Gene tree

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