Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MAPK9 ENSSSCG00000014010

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Description

mitogen-activated protein kinase 9 [Source:VGNC Symbol;Acc:VGNC:90009]

Location

Primary_assembly 2: 78,338,376-78,399,100 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 6 transcripts (splice variants), 221 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000035631.4	MAPK9-204	4474	424aa	ENSSSCP00000029825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VWV3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000053607.3	MAPK9-205	4474	424aa	ENSSSCP00000046017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VQA9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000054897.3	MAPK9-206	4219	339aa	ENSSSCP00000046994.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VVX0	-
ENSSSCT00000069451.1	MAPK9-203	2499	247aa	ENSSSCP00000074278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1FMT5	-
ENSSSCT00000015303.5	MAPK9-202	861	242aa	ENSSSCP00000014895.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VUS0	-
ENSSSCT00000066864.2	MAPK9-201	837	124aa	ENSSSCP00000062761.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1TC02	-

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Gene tree

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