Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ATP2C1 ENSSSCG00000011183

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Description

ATPase secretory pathway Ca2+ transporting 1 [Source:VGNC Symbol;Acc:VGNC:85652]

Location

Primary_assembly 13: 1,438,615-1,612,676 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 4 transcripts (splice variants), 225 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000091541.2	ATP2C1-204	5125	949aa	ENSSSCP00000072500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RDL8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000083235.2	ATP2C1-203	5045	918aa	ENSSSCP00000071731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R3R7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000089895.2	ATP2C1-201	3358	944aa	ENSSSCP00000062440.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QFD1	-
ENSSSCT00000012246.4	ATP2C1-202	3123	948aa	ENSSSCP00000011931.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RSA2	-

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Gene tree

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