Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LHX9 ENSSSCG00000010903

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Description

LIM homeobox 9 [Source:VGNC Symbol;Acc:VGNC:95608]

Location

Primary_assembly 10: 20,742,398-20,764,008 forward strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 2 transcripts (splice variants), 203 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000011930.5	LHX9-201	2352	388aa	ENSSSCP00000011623.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0N9S0 F1S5F5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000050528.3	LHX9-202	2529	321aa	ENSSSCP00000032266.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SPH7 A0A8D1M9Z7	-

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Gene tree

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