Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PRDM5 ENSSSCG00000009101

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Description

PR/SET domain 5 [Source:VGNC Symbol;Acc:VGNC:98953]

Location

Primary_assembly 8: 103,189,561-103,382,094 forward strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000053281.2	PRDM5-202	5034	630aa	ENSSSCP00000047373.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ATG2 A0A4X1V8P3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000053619.3	PRDM5-203	4941	599aa	ENSSSCP00000042369.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AEH3 A0A4X1V9G6	-
ENSSSCT00000043561.3	PRDM5-201	2581	501aa	ENSSSCP00000043570.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AI64 A0A4X1V8F4	-

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Gene tree

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