Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PDE7A ENSSSCG00000006218

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Description

phosphodiesterase 7A [Source:VGNC Symbol;Acc:VGNC:91261]

Location

Primary_assembly 4: 68,779,540-68,896,577 forward strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 2 transcripts (splice variants), 251 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000006814.5	PDE7A-202	3252	483aa	ENSSSCP00000006629.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V115 F1RTC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000058082.2	PDE7A-201	3366	482aa	ENSSSCP00000045494.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ANM9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Gene tree

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