Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HDAC1 ENSSSCG00000003613

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Description

histone deacetylase 1 [Source:VGNC Symbol;Acc:VGNC:88810]

Location

Primary_assembly 6: 88,749,634-88,785,411 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 3 transcripts (splice variants), 293 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000029863.3	HDAC1-202	2012	491aa	ENSSSCP00000021778.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LCK3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000073929.1	HDAC1-203	2505	478aa	ENSSSCP00000074072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RAM8	-
ENSSSCT00000004008.5	HDAC1-201	2293	482aa	ENSSSCP00000003917.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SV89	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Gene tree

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