Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CPSF3 ENSSSCG00000020799

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Description

cleavage and polyadenylation specific factor 3 [Source:VGNC Symbol;Acc:VGNC:86960]

Location

Primary_assembly 3: 126,868,467-126,905,746 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 5 transcripts (splice variants), 245 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000027309.4	CPSF3-203	2702	712aa	ENSSSCP00000024676.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LKR1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000067168.2	CPSF3-202	4750	619aa	ENSSSCP00000061122.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UFW8 A0A5G2QAS5	-
ENSSSCT00000086759.2	CPSF3-201	4634	621aa	ENSSSCP00000065097.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QSY2	-
ENSSSCT00000073261.2	CPSF3-204	2639	684aa	ENSSSCP00000059746.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UGM3 A0A8D1EW24	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000062671.3	CPSF3-205	2595	630aa	ENSSSCP00000053895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UGP5 A0A8D0I2N3	-

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Paralogues

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