Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SRSF1 ENSSSCG00000017626

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Description

serine and arginine rich splicing factor 1 [Source:VGNC Symbol;Acc:VGNC:99084]

Location

Primary_assembly 12: 34,272,956-34,282,162 reverse strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 5 transcripts (splice variants), 241 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000048013.3	SRSF1-203	1486	253aa	ENSSSCP00000057405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BMV2 A0A8D1QXF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000043811.2	SRSF1-204	5163	248aa	ENSSSCP00000057414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3YLA6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000086503.2	SRSF1-205	3929	199aa	ENSSSCP00000064919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R2Z1 A0A8D1YC86	-
ENSSSCT00000019188.4	SRSF1-202	2741	236aa	ENSSSCP00000018680.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6GJG2 A0A8D1DMD3	-
ENSSSCT00000102696.1	SRSF1-201	356	73aa	ENSSSCP00000075267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1DL73 A0A8W4FAE5	-

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Paralogues

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