Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCARB1 ENSSSCG00000009759

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Description

scavenger receptor class B member 1 [Source:NCBI gene (formerly Entrezgene);Acc:397018]

Location

Primary_assembly 14: 28,301,294-28,393,568 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 8 transcripts (splice variants), 206 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000047834.3	SCARB1-202	2615	506aa	ENSSSCP00000035655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZVH8 A0A4X1UJW8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000090743.1	SCARB1-207	4335	495aa	ENSSSCP00000072643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R8K4 A0A8D1V3Z8	-
ENSSSCT00000072551.2	SCARB1-204	2606	503aa	ENSSSCP00000069016.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QVX0	-
ENSSSCT00000010699.5	SCARB1-201	2486	457aa	ENSSSCP00000010421.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A900P4U3	-
ENSSSCT00000069226.2	SCARB1-203	2417	440aa	ENSSSCP00000071927.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RCF6	-
ENSSSCT00000077224.1	SCARB1-206	2386	484aa	ENSSSCP00000067560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QRL4 A0A8D1V5I8	-
ENSSSCT00000095964.1	SCARB1-208	1484	490aa	ENSSSCP00000077119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FCX7	-
ENSSSCT00000075769.2	SCARB1-205	1484	490aa	ENSSSCP00000061069.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QC19	-

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Paralogues

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