Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VAPB ENSSSCG00000007514

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Description

VAMP associated protein B and C [Source:VGNC Symbol;Acc:VGNC:108743]

Location

Primary_assembly 17: 58,594,749-58,644,914 forward strand.

Sscrofa11.1:CM000828.5

About this gene

This gene has 2 transcripts (splice variants), 278 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000052330.3	VAPB-202	2140	243aa	ENSSSCP00000049987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B186 A0A8D1IGG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000067814.1	VAPB-201	637	100aa	ENSSSCP00000067030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QSD0 A0A8D1A202	-

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Paralogues

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