Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDH1 ENSSSCG00000025652

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Description

cadherin 1 [Source:NCBI gene (formerly Entrezgene);Acc:100048953]

Gene Synonyms

E-cadherin

Location

Primary_assembly 6: 18,075,480-18,155,986 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 3 transcripts (splice variants), 142 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000041655.4	CDH1-201	4274	883aa	ENSSSCP00000058117.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BPL8 A0A8D0XSX6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000107929.1	CDH1-203	6722	838aa	ENSSSCP00000082302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSCT00000058692.4	CDH1-202	4091	822aa	ENSSSCP00000059570.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BSR8 A0A8D0XT04	-

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Orthologues

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