Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LARP1 ENSSSCG00000017069

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Description

La ribonucleoprotein 1, translational regulator [Source:VGNC Symbol;Acc:VGNC:98067]

Location

Primary_assembly 16: 68,390,880-68,484,918 reverse strand.

Sscrofa11.1:CM000827.5

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000018585.5	LARP1-202	4289	1101aa	ENSSSCP00000018085.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1SM47 F1RQC5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000067840.2	LARP1-201	5515	844aa	ENSSSCP00000064711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QIT4 A0A8D1SCD4	-
ENSSSCT00000043906.1	LARP1-203	3933	895aa	ENSSSCP00000044410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AKJ3 A0A4X1TWJ8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Orthologues

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