Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BTRC ENSSSCG00000010563

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Description

beta-transducin repeat containing E3 ubiquitin protein ligase [Source:VGNC Symbol;Acc:VGNC:107368]

Location

Primary_assembly 14: 112,398,868-112,588,037 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 9 transcripts (splice variants), 142 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000092659.1	BTRC-208	2285	634aa	ENSSSCP00000076094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TWX7 A0A8W4FCR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000049083.3	BTRC-201	6524	579aa	ENSSSCP00000046219.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQ79 A0A4X1U248	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000055591.2	BTRC-203	6467	568aa	ENSSSCP00000041513.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U1W1 A0A8D1HFC5	-
ENSSSCT00000046264.2	BTRC-205	6387	543aa	ENSSSCP00000037025.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TWV3 A0A8D0TR46	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000011555.4	BTRC-204	6376	567aa	ENSSSCP00000011253.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U282 A0A8D1UI98	-
ENSSSCT00000069725.2	BTRC-207	6362	549aa	ENSSSCP00000062184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1T1N3 A0A8D1ZMT1	-
ENSSSCT00000091440.2	BTRC-202	6287	531aa	ENSSSCP00000064500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QI74 A0A8D1PNG8	-
ENSSSCT00000055250.2	BTRC-206	5193	579aa	ENSSSCP00000035000.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZU41 A0A8D0IF02	-
ENSSSCT00000052856.3	BTRC-209	2110	575aa	ENSSSCP00000046172.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQ55 A0A8D1P928	-

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Orthologues

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