Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: WDSUB1 ENSSSCG00000035702

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Description

WD repeat, sterile alpha motif and U-box domain containing 1 [Source:VGNC Symbol;Acc:VGNC:96136]

Location

Primary_assembly 15: 66,166,450-66,239,190 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 5 transcripts (splice variants) and 244 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050872.2	WDSUB1-204	3358	476aa	ENSSSCP00000058074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BN83 A0A4X1VQ87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000084022.1	WDSUB1-205	3082	384aa	ENSSSCP00000062196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VNT2 A0A5G2QDI4	-
ENSSSCT00000077733.1	WDSUB1-201	2696	438aa	ENSSSCP00000070068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QYW1 A0A8D1J813	-
ENSSSCT00000053919.3	WDSUB1-203	1899	445aa	ENSSSCP00000038362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A345 A0A4X1VRE2	-
ENSSSCT00000089881.1	WDSUB1-202	1834	429aa	ENSSSCP00000063775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VPE4 A0A5G2QZU6	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data