Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ENSSSCG00000035224

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Location

Primary_assembly 12: 25,426,111-25,441,306 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 4 transcripts (splice variants), 178 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000063538.3	-	1731	357aa	ENSSSCP00000052087.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B7K5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000024337.4	-	1410	301aa	ENSSSCP00000021220.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LB01	-
ENSSSCT00000090538.3	-	1527	47aa	ENSSSCP00000066394.3	Nonsense mediated decay	A0A5G2QWS8	-
ENSSSCT00000081297.3	-	1324	132aa	ENSSSCP00000072887.2	Nonsense mediated decay	A0A5G2R6K6	-

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Breeds

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Gene tree

Orthologues

Paralogues

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data