Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: RFT1 ENSSSCG00000034614

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Description

RFT1 homolog [Source:VGNC Symbol;Acc:VGNC:111202]

Location

Primary_assembly 13: 35,207,145-35,257,795 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 4 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000043490.3	RFT1-202	4937	541aa	ENSSSCP00000046311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQX7 A0A8D1MNS0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000027960.3	RFT1-204	5219	513aa	ENSSSCP00000027580.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0JKS5 A0A8D1MTF2	-
ENSSSCT00000049006.3	RFT1-203	4835	507aa	ENSSSCP00000045374.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AN97	-
ENSSSCT00000070696.2	RFT1-201	1575	468aa	ENSSSCP00000070886.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RHM9	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data