Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMURF1 ENSSSCG00000030153

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Description

SMAD specific E3 ubiquitin protein ligase 1 [Source:VGNC Symbol;Acc:VGNC:93270]

Location

Primary_assembly 3: 6,037,741-6,142,575 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 2 transcripts (splice variants), 208 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000028241.4	SMURF1-201	5373	757aa	ENSSSCP00000027381.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U553 I3LTD6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000088272.2	SMURF1-202	5295	731aa	ENSSSCP00000069876.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U770 A0A5G2QY82	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data