Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: AKR1A1 ENSSSCG00000029256

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Description

aldo-keto reductase family 1 member A1 [Source:VGNC Symbol;Acc:VGNC:85229]

Location

Primary_assembly 6: 165,811,247-165,824,896 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 3 transcripts (splice variants), 239 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000042479.3	AKR1A1-203	1245	365aa	ENSSSCP00000057347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BMP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000030677.3	AKR1A1-202	1635	349aa	ENSSSCP00000020540.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6GLX4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000043057.2	AKR1A1-201	1430	347aa	ENSSSCP00000038686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A3Y9 A0A8D1NJE5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data