Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM2 ENSSSCG00000029200

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Description

tripartite motif containing 2 [Source:VGNC Symbol;Acc:VGNC:94397]

Location

Primary_assembly 8: 75,771,048-75,890,357 reverse strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 7 transcripts (splice variants), 202 orthologues and 75 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000092666.1	TRIM2-203	3277	774aa	ENSSSCP00000075921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1QAP8 A0A8W4F9B9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000026657.4	TRIM2-201	5978	606aa	ENSSSCP00000020454.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3L8U3	-
ENSSSCT00000043428.3	TRIM2-202	3460	736aa	ENSSSCP00000040899.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AAT8 A0A4X1SQM3	-
ENSSSCT00000105822.1	TRIM2-206	3299	715aa	ENSSSCP00000079275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JMQ6 A0A8W4FK52	-
ENSSSCT00000091719.1	TRIM2-204	3281	709aa	ENSSSCP00000078521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FGG1	-
ENSSSCT00000095566.1	TRIM2-205	2936	594aa	ENSSSCP00000080326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FLH4	-
ENSSSCT00000044920.3	TRIM2-207	2627	762aa	ENSSSCP00000040482.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A9K5 A0A4X1SQM9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data